Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smco3Q8BQM7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smco3Q8BQM7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.84□□□□□ -0.03
Smco3Q8BQM7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smco3Q8BQM7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smco3Q8BQM7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smco3Q8BQM7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smco3Q8BQM7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Smco3Q8BQM7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.81□□□□□ -0.04
Smco3Q8BQM7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smco3Q8BQM7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco3Q8BQM7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco3Q8BQM7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco3Q8BQM7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco3Q8BQM7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco3Q8BQM7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms