Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3hc1Q80YV2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3hc1Q80YV2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3hc1Q80YV2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Gm6139-201ENSMUST00000079261 882 ntBASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3hc1Q80YV2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Gm12821-201ENSMUST00000120022 600 ntBASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Zc3hc1Q80YV2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Zc3hc1Q80YV2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Zc3hc1Q80YV2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Zc3hc1Q80YV2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Zc3hc1Q80YV2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Zc3hc1Q80YV2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3hc1Q80YV2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zc3hc1Q80YV2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3hc1Q80YV2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3hc1Q80YV2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3hc1Q80YV2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3hc1Q80YV2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3hc1Q80YV2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3hc1Q80YV2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3hc1Q80YV2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms