Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.6□□□□□ -0.07
Zic4Q61467 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Zic4Q61467 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Zic4Q61467 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Zic4Q61467 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.59□□□□□ -0.07
Zic4Q61467 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Zic4Q61467 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Zic4Q61467 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Zic4Q61467 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Zic4Q61467 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Zic4Q61467 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Zic4Q61467 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Zic4Q61467 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Zic4Q61467 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Zic4Q61467 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Zic4Q61467 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Zic4Q61467 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Zic4Q61467 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.58□□□□□ -0.08
Zic4Q61467 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Zic4Q61467 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.58□□□□□ -0.08
Zic4Q61467 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Zic4Q61467 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.58□□□□□ -0.08
Zic4Q61467 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Zic4Q61467 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Zic4Q61467 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Zic4Q61467 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Zic4Q61467 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.57□□□□□ -0.08
Zic4Q61467 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.57□□□□□ -0.08
Zic4Q61467 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.57□□□□□ -0.08
Zic4Q61467 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Zic4Q61467 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Zic4Q61467 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Zic4Q61467 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Zic4Q61467 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Zic4Q61467 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.56□□□□□ -0.08
Zic4Q61467 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.56□□□□□ -0.08
Zic4Q61467 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.56□□□□□ -0.08
Zic4Q61467 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Zic4Q61467 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zic4Q61467 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.56□□□□□ -0.08
Zic4Q61467 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.55□□□□□ -0.08
Zic4Q61467 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zic4Q61467 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Zic4Q61467 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zic4Q61467 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zic4Q61467 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Zic4Q61467 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms