Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn4Q61418 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.59■□□□□ 0.25
Clcn4Q61418 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn4Q61418 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn4Q61418 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn4Q61418 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn4Q61418 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn4Q61418 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn4Q61418 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn4Q61418 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn4Q61418 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcn4Q61418 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn4Q61418 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn4Q61418 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Clcn4Q61418 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.58■□□□□ 0.24
Clcn4Q61418 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.58■□□□□ 0.24
Clcn4Q61418 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Clcn4Q61418 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn4Q61418 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn4Q61418 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn4Q61418 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clcn4Q61418 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.58■□□□□ 0.24
Clcn4Q61418 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn4Q61418 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn4Q61418 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn4Q61418 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn4Q61418 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn4Q61418 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn4Q61418 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn4Q61418 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.57■□□□□ 0.24
Clcn4Q61418 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn4Q61418 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Clcn4Q61418 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn4Q61418 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn4Q61418 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn4Q61418 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn4Q61418 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn4Q61418 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn4Q61418 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn4Q61418 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Gm13534-201ENSMUST00000121169 513 ntBASIC16.56■□□□□ 0.24
Clcn4Q61418 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Clcn4Q61418 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Clcn4Q61418 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.56■□□□□ 0.24
Clcn4Q61418 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Clcn4Q61418 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Clcn4Q61418 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn4Q61418 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Clcn4Q61418 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Clcn4Q61418 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.55■□□□□ 0.24
Clcn4Q61418 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn4Q61418 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Clcn4Q61418 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Clcn4Q61418 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Clcn4Q61418 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn4Q61418 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn4Q61418 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.55■□□□□ 0.24
Clcn4Q61418 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.55■□□□□ 0.24
Clcn4Q61418 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.55■□□□□ 0.24
Clcn4Q61418 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Clcn4Q61418 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Clcn4Q61418 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn4Q61418 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn4Q61418 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn4Q61418 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.55■□□□□ 0.24
Clcn4Q61418 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Clcn4Q61418 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn4Q61418 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn4Q61418 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
Clcn4Q61418 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Clcn4Q61418 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Clcn4Q61418 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.54■□□□□ 0.24
Clcn4Q61418 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn4Q61418 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Clcn4Q61418 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Clcn4Q61418 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms