Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Gm15375-201ENSMUST00000119510 849 ntBASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-4Q5R1I0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-4Q5R1I0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-4Q5R1I0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav6d-4Q5R1I0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav6d-4Q5R1I0 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.08■□□□□ 0.01
Trav6d-4Q5R1I0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6d-4Q5R1I0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6d-4Q5R1I0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-4Q5R1I0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-4Q5R1I0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-4Q5R1I0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav6d-4Q5R1I0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.08■□□□□ 0
Trav6d-4Q5R1I0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-4Q5R1I0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-4Q5R1I0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-4Q5R1I0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-4Q5R1I0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms