Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Gm7417-201ENSMUST00000192950 473 ntBASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Trav3-3Q5R1C3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3-3Q5R1C3 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.52□□□□□ -0.24
Trav3-3Q5R1C3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3-3Q5R1C3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3-3Q5R1C3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3-3Q5R1C3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3-3Q5R1C3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3-3Q5R1C3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-3Q5R1C3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav3-3Q5R1C3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3-3Q5R1C3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms