Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.9■□□□□ 0.62
Cul4aQ3TCH7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cul4aQ3TCH7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cul4aQ3TCH7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Cul4aQ3TCH7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cul4aQ3TCH7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.89■□□□□ 0.61
Cul4aQ3TCH7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cul4aQ3TCH7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cul4aQ3TCH7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.89■□□□□ 0.61
Cul4aQ3TCH7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cul4aQ3TCH7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cul4aQ3TCH7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cul4aQ3TCH7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cul4aQ3TCH7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cul4aQ3TCH7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cul4aQ3TCH7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.88■□□□□ 0.61
Cul4aQ3TCH7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cul4aQ3TCH7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cul4aQ3TCH7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cul4aQ3TCH7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cul4aQ3TCH7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cul4aQ3TCH7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cul4aQ3TCH7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cul4aQ3TCH7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cul4aQ3TCH7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cul4aQ3TCH7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cul4aQ3TCH7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms