Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tpm1P58771 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.1■□□□□ 0.81
Tpm1P58771 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Tpm1P58771 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.1■□□□□ 0.81
Tpm1P58771 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
Tpm1P58771 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tpm1P58771 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Tpm1P58771 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm1P58771 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Tpm1P58771 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Tpm1P58771 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm1P58771 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Tpm1P58771 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.08■□□□□ 0.81
Tpm1P58771 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.08■□□□□ 0.81
Tpm1P58771 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm1P58771 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm1P58771 Gm8493-201ENSMUST00000196881 489 ntBASIC20.08■□□□□ 0.81
Tpm1P58771 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Tpm1P58771 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tpm1P58771 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Tpm1P58771 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Tpm1P58771 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tpm1P58771 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Tpm1P58771 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm1P58771 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.07■□□□□ 0.8
Tpm1P58771 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.07■□□□□ 0.8
Tpm1P58771 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm1P58771 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm1P58771 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm1P58771 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm1P58771 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm1P58771 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.06■□□□□ 0.8
Tpm1P58771 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Tpm1P58771 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm1P58771 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm1P58771 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm1P58771 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.06■□□□□ 0.8
Tpm1P58771 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm1P58771 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
Tpm1P58771 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm1P58771 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm1P58771 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.05■□□□□ 0.8
Tpm1P58771 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm1P58771 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm1P58771 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tpm1P58771 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.05■□□□□ 0.8
Tpm1P58771 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm1P58771 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tpm1P58771 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm1P58771 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm1P58771 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tpm1P58771 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tpm1P58771 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm1P58771 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm1P58771 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tpm1P58771 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Tpm1P58771 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tpm1P58771 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Tpm1P58771 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Tpm1P58771 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms