Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.57□□□□□ -0.08
Sssca1P56873 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sssca1P56873 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.56□□□□□ -0.08
Sssca1P56873 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sssca1P56873 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.55□□□□□ -0.08
Sssca1P56873 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.55□□□□□ -0.08
Sssca1P56873 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.55□□□□□ -0.08
Sssca1P56873 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sssca1P56873 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Sssca1P56873 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sssca1P56873 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sssca1P56873 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sssca1P56873 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.54□□□□□ -0.08
Sssca1P56873 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.54□□□□□ -0.08
Sssca1P56873 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.54□□□□□ -0.08
Sssca1P56873 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.54□□□□□ -0.08
Sssca1P56873 Gm6139-201ENSMUST00000079261 882 ntBASIC14.54□□□□□ -0.08
Sssca1P56873 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sssca1P56873 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Sssca1P56873 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sssca1P56873 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sssca1P56873 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sssca1P56873 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sssca1P56873 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sssca1P56873 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.54□□□□□ -0.08
Sssca1P56873 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.54□□□□□ -0.08
Sssca1P56873 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sssca1P56873 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sssca1P56873 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sssca1P56873 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sssca1P56873 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sssca1P56873 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sssca1P56873 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Sssca1P56873 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.53□□□□□ -0.08
Sssca1P56873 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.53□□□□□ -0.08
Sssca1P56873 Gm27454-201ENSMUST00000185090 204 ntBASIC14.53□□□□□ -0.08
Sssca1P56873 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.53□□□□□ -0.08
Sssca1P56873 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms