Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 PAU11YGL261C 363 nt3.32□□□□□ -1.88
RFX1P48743 PAU4YLR461W 363 nt3.32□□□□□ -1.88
RFX1P48743 OST6YML019W 999 nt3.32□□□□□ -1.88
RFX1P48743 YPL197CYPL197C 414 nt3.32□□□□□ -1.88
RFX1P48743 GPI17YDR434W 1605 nt3.32□□□□□ -1.88
RFX1P48743 LCB4YOR171C 1875 nt3.32□□□□□ -1.88
RFX1P48743 SEA4YBL104C 3117 nt3.31□□□□□ -1.88
RFX1P48743 ZDS2YML109W 2829 nt3.31□□□□□ -1.88
RFX1P48743 YER091C-AYER091C-A 222 nt3.31□□□□□ -1.88
RFX1P48743 RTT105YER104W 627 nt3.31□□□□□ -1.88
RFX1P48743 SRC1YML034W 2505 nt3.31□□□□□ -1.88
RFX1P48743 UTP13YLR222C 2454 nt3.31□□□□□ -1.88
RFX1P48743 UBP5YER144C 2418 nt3.31□□□□□ -1.88
RFX1P48743 YGR237CYGR237C 2358 nt3.31□□□□□ -1.88
RFX1P48743 TOP1YOL006C 2310 nt3.31□□□□□ -1.88
RFX1P48743 CCM1YGR150C 2595 nt3.3□□□□□ -1.88
RFX1P48743 YDL176WYDL176W 2127 nt3.3□□□□□ -1.88
RFX1P48743 YDL240C-AYDL240C-A 138 nt3.3□□□□□ -1.88
RFX1P48743 RPS26BYER131W 360 nt3.3□□□□□ -1.88
RFX1P48743 YPS5YGL259W 498 nt3.3□□□□□ -1.88
RFX1P48743 RPS1AYLR441C 768 nt3.3□□□□□ -1.88
RFX1P48743 YMR193C-AYMR193C-A 387 nt3.3□□□□□ -1.88
RFX1P48743 MUS81YDR386W 1899 nt3.3□□□□□ -1.88
RFX1P48743 MET10YFR030W 3108 nt3.3□□□□□ -1.88
RFX1P48743 ARG2YJL071W 1725 nt3.3□□□□□ -1.88
RFX1P48743 SEC15YGL233W 2733 nt3.29□□□□□ -1.88
RFX1P48743 YDR090CYDR090C 933 nt3.29□□□□□ -1.88
RFX1P48743 RPL1BYGL135W 654 nt3.29□□□□□ -1.88
RFX1P48743 YJL169WYJL169W 369 nt3.29□□□□□ -1.88
RFX1P48743 YNL179CYNL179C 438 nt3.29□□□□□ -1.88
RFX1P48743 CDC33YOL139C 642 nt3.29□□□□□ -1.88
RFX1P48743 HSP10YOR020C 321 nt3.29□□□□□ -1.88
RFX1P48743 RPL1AYPL220W 654 nt3.29□□□□□ -1.88
RFX1P48743 YPR053CYPR053C 456 nt3.29□□□□□ -1.88
RFX1P48743 PWP2YCR057C 2772 nt3.29□□□□□ -1.88
RFX1P48743 ATP25YMR098C 1839 nt3.28□□□□□ -1.88
RFX1P48743 JJJ2YJL162C 1752 nt3.28□□□□□ -1.88
RFX1P48743 PFK26YIL107C 2484 nt3.28□□□□□ -1.88
RFX1P48743 YCR081C-AYCR081C-A 237 nt3.28□□□□□ -1.88
RFX1P48743 YER038W-AYER038W-A 381 nt3.28□□□□□ -1.88
RFX1P48743 RPL30YGL030W 318 nt3.28□□□□□ -1.88
RFX1P48743 VOA1YGR106C 798 nt3.28□□□□□ -1.88
RFX1P48743 YLR302CYLR302C 363 nt3.28□□□□□ -1.88
RFX1P48743 NOP4YPL043W 2058 nt3.28□□□□□ -1.89
RFX1P48743 EMP70YLR083C 2004 nt3.27□□□□□ -1.89
RFX1P48743 STP2YHR006W 1626 nt3.27□□□□□ -1.89
RFX1P48743 STT4YLR305C 5703 nt3.27□□□□□ -1.89
RFX1P48743 FAR1YJL157C 2493 nt3.27□□□□□ -1.89
RFX1P48743 YDR194W-AYDR194W-A 153 nt3.27□□□□□ -1.89
RFX1P48743 LSM1YJL124C 519 nt3.27□□□□□ -1.89
RFX1P48743 YKL136WYKL136W 399 nt3.27□□□□□ -1.89
RFX1P48743 TEN1YLR010C 483 nt3.27□□□□□ -1.89
RFX1P48743 YLR230WYLR230W 306 nt3.27□□□□□ -1.89
RFX1P48743 YHR080CYHR080C 4038 nt3.27□□□□□ -1.89
RFX1P48743 21S_rRNA21S_rRNA 3296 nt3.27□□□□□ -1.89
RFX1P48743 CIN1YOR349W 3045 nt3.26□□□□□ -1.89
RFX1P48743 RPL27BYDR471W 411 nt3.26□□□□□ -1.89
RFX1P48743 COX23YHR116W 456 nt3.26□□□□□ -1.89
RFX1P48743 MRP8YKL142W 660 nt3.26□□□□□ -1.89
RFX1P48743 HHT2YNL031C 411 nt3.26□□□□□ -1.89
RFX1P48743 YOR105WYOR105W 327 nt3.26□□□□□ -1.89
RFX1P48743 YPL080CYPL080C 327 nt3.26□□□□□ -1.89
RFX1P48743 TSC3YBR058C-A 243 nt3.26□□□□□ -1.89
RFX1P48743 GCN1YGL195W 8019 nt3.26□□□□□ -1.89
RFX1P48743 ARO1YDR127W 4767 nt3.25□□□□□ -1.89
RFX1P48743 MES1YGR264C 2256 nt3.25□□□□□ -1.89
RFX1P48743 RNH70YGR276C 1662 nt3.25□□□□□ -1.89
RFX1P48743 SDH7YDR511W 402 nt3.25□□□□□ -1.89
RFX1P48743 YER181CYER181C 324 nt3.25□□□□□ -1.89
RFX1P48743 YGL165CYGL165C 579 nt3.25□□□□□ -1.89
RFX1P48743 CIN8YEL061C 3003 nt3.25□□□□□ -1.89
RFX1P48743 HFM1YGL251C 3564 nt3.25□□□□□ -1.89
RFX1P48743 URB2YJR041C 3525 nt3.25□□□□□ -1.89
RFX1P48743 MSL5YLR116W 1431 nt3.25□□□□□ -1.89
RFX1P48743 BFR1YOR198C 1413 nt3.25□□□□□ -1.89
RFX1P48743 ALY1YKR021W 2748 nt3.25□□□□□ -1.89
RFX1P48743 SLP1YOR154W 1764 nt3.25□□□□□ -1.89
RFX1P48743 CHO2YGR157W 2610 nt3.24□□□□□ -1.89
RFX1P48743 LAG1YHL003C 1236 nt3.24□□□□□ -1.89
RFX1P48743 SRL3YKR091W 741 nt3.24□□□□□ -1.89
RFX1P48743 TVP18YMR071C 504 nt3.24□□□□□ -1.89
RFX1P48743 YMR141CYMR141C 309 nt3.24□□□□□ -1.89
RFX1P48743 YPR077CYPR077C 372 nt3.24□□□□□ -1.89
RFX1P48743 KHA1YJL094C 2622 nt3.24□□□□□ -1.89
RFX1P48743 YLR001CYLR001C 2589 nt3.24□□□□□ -1.89
RFX1P48743 KAP95YLR347C 2586 nt3.24□□□□□ -1.89
RFX1P48743 SKN7YHR206W 1869 nt3.24□□□□□ -1.89
RFX1P48743 DOA4YDR069C 2781 nt3.23□□□□□ -1.89
RFX1P48743 GNT1YOR320C 1476 nt3.23□□□□□ -1.89
RFX1P48743 STE14YDR410C 720 nt3.23□□□□□ -1.89
RFX1P48743 YJR079WYJR079W 330 nt3.23□□□□□ -1.89
RFX1P48743 YAL063C-AYAL063C-A 291 nt3.23□□□□□ -1.89
RFX1P48743 PEX17YNL214W 600 nt3.23□□□□□ -1.89
RFX1P48743 PEX11YOL147C 711 nt3.23□□□□□ -1.89
RFX1P48743 ERP4YOR016C 624 nt3.23□□□□□ -1.89
RFX1P48743 YOR073W-AYOR073W-A 234 nt3.23□□□□□ -1.89
RFX1P48743 PFY1YOR122C 381 nt3.23□□□□□ -1.89
RFX1P48743 YPL039WYPL039W 951 nt3.23□□□□□ -1.89
RFX1P48743 NTO1YPR031W 2247 nt3.23□□□□□ -1.89
RFX1P48743 SEN54YPL083C 1404 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms