Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf9P41274 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf9P41274 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf9P41274 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf9P41274 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf9P41274 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnfsf9P41274 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf9P41274 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tnfsf9P41274 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.22■□□□□ 0.35
Tnfsf9P41274 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf9P41274 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.22■□□□□ 0.35
Tnfsf9P41274 Gm15375-201ENSMUST00000119510 849 ntBASIC17.22■□□□□ 0.35
Tnfsf9P41274 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.22■□□□□ 0.35
Tnfsf9P41274 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf9P41274 Mir6982-201ENSMUST00000184354 68 ntBASIC17.22■□□□□ 0.35
Tnfsf9P41274 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tnfsf9P41274 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Tnfsf9P41274 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf9P41274 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnfsf9P41274 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf9P41274 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.21■□□□□ 0.35
Tnfsf9P41274 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.21■□□□□ 0.35
Tnfsf9P41274 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tnfsf9P41274 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.21■□□□□ 0.34
Tnfsf9P41274 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.2■□□□□ 0.34
Tnfsf9P41274 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf9P41274 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfsf9P41274 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfsf9P41274 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.19■□□□□ 0.34
Tnfsf9P41274 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfsf9P41274 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.19■□□□□ 0.34
Tnfsf9P41274 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfsf9P41274 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfsf9P41274 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfsf9P41274 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Mir1199-201ENSMUST00000117015 119 ntBASIC17.18■□□□□ 0.34
Tnfsf9P41274 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.18■□□□□ 0.34
Tnfsf9P41274 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf9P41274 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf9P41274 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.17■□□□□ 0.34
Tnfsf9P41274 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf9P41274 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.17■□□□□ 0.34
Tnfsf9P41274 Mir6349-201ENSMUST00000184059 97 ntBASIC17.17■□□□□ 0.34
Tnfsf9P41274 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf9P41274 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.17■□□□□ 0.34
Tnfsf9P41274 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf9P41274 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf9P41274 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf9P41274 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf9P41274 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tnfsf9P41274 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf9P41274 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms