Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sox6P40645 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sox6P40645 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sox6P40645 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sox6P40645 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
Sox6P40645 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.9■□□□□ 0.3
Sox6P40645 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
Sox6P40645 Gm10033-202ENSMUST00000211874 928 ntBASIC16.9■□□□□ 0.3
Sox6P40645 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sox6P40645 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.9■□□□□ 0.3
Sox6P40645 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox6P40645 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Sox6P40645 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sox6P40645 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sox6P40645 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sox6P40645 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Sox6P40645 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.89■□□□□ 0.29
Sox6P40645 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sox6P40645 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.89■□□□□ 0.29
Sox6P40645 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.89■□□□□ 0.29
Sox6P40645 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.89■□□□□ 0.29
Sox6P40645 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.89■□□□□ 0.29
Sox6P40645 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Sox6P40645 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.89■□□□□ 0.29
Sox6P40645 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Sox6P40645 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox6P40645 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox6P40645 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sox6P40645 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox6P40645 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sox6P40645 Gm13146-201ENSMUST00000118508 780 ntBASIC16.88■□□□□ 0.29
Sox6P40645 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox6P40645 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.88■□□□□ 0.29
Sox6P40645 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.88■□□□□ 0.29
Sox6P40645 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sox6P40645 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sox6P40645 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sox6P40645 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sox6P40645 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox6P40645 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox6P40645 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox6P40645 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sox6P40645 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox6P40645 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sox6P40645 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sox6P40645 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Sox6P40645 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Sox6P40645 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 Gm42569-201ENSMUST00000200539 472 ntBASIC16.87■□□□□ 0.29
Sox6P40645 AV356131-201ENSMUST00000206201 750 ntBASIC16.87■□□□□ 0.29
Sox6P40645 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sox6P40645 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.87■□□□□ 0.29
Sox6P40645 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sox6P40645 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox6P40645 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox6P40645 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.86■□□□□ 0.29
Sox6P40645 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox6P40645 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox6P40645 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox6P40645 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms