Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nckap1P28660 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nckap1P28660 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.9■□□□□ 0.46
Nckap1P28660 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nckap1P28660 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.9■□□□□ 0.46
Nckap1P28660 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.9■□□□□ 0.46
Nckap1P28660 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nckap1P28660 Gm5417-201ENSMUST00000079706 384 ntBASIC17.9■□□□□ 0.46
Nckap1P28660 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nckap1P28660 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.9■□□□□ 0.46
Nckap1P28660 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nckap1P28660 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nckap1P28660 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nckap1P28660 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nckap1P28660 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nckap1P28660 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nckap1P28660 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nckap1P28660 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nckap1P28660 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Nckap1P28660 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.89■□□□□ 0.45
Nckap1P28660 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nckap1P28660 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nckap1P28660 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.89■□□□□ 0.45
Nckap1P28660 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Gm12382-201ENSMUST00000122005 922 ntBASIC17.89■□□□□ 0.45
Nckap1P28660 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Gm7977-201ENSMUST00000193787 748 ntBASIC17.89■□□□□ 0.45
Nckap1P28660 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nckap1P28660 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nckap1P28660 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.88■□□□□ 0.45
Nckap1P28660 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.88■□□□□ 0.45
Nckap1P28660 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.88■□□□□ 0.45
Nckap1P28660 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nckap1P28660 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.88■□□□□ 0.45
Nckap1P28660 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nckap1P28660 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.87■□□□□ 0.45
Nckap1P28660 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nckap1P28660 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nckap1P28660 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.87■□□□□ 0.45
Nckap1P28660 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.87■□□□□ 0.45
Nckap1P28660 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nckap1P28660 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.87■□□□□ 0.45
Nckap1P28660 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nckap1P28660 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.87■□□□□ 0.45
Nckap1P28660 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nckap1P28660 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nckap1P28660 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nckap1P28660 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.87■□□□□ 0.45
Nckap1P28660 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nckap1P28660 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nckap1P28660 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nckap1P28660 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nckap1P28660 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nckap1P28660 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.86■□□□□ 0.45
Nckap1P28660 Gm37292-201ENSMUST00000192062 758 ntBASIC17.86■□□□□ 0.45
Nckap1P28660 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nckap1P28660 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nckap1P28660 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nckap1P28660 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Nckap1P28660 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nckap1P28660 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nckap1P28660 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nckap1P28660 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nckap1P28660 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nckap1P28660 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nckap1P28660 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nckap1P28660 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Nckap1P28660 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nckap1P28660 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nckap1P28660 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms