Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdh16O88338 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cdh16O88338 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cdh16O88338 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.63■□□□□ 0.41
Cdh16O88338 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.63■□□□□ 0.41
Cdh16O88338 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.63■□□□□ 0.41
Cdh16O88338 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh16O88338 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdh16O88338 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh16O88338 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Cdh16O88338 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh16O88338 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.62■□□□□ 0.41
Cdh16O88338 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdh16O88338 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cdh16O88338 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cdh16O88338 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh16O88338 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh16O88338 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh16O88338 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh16O88338 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh16O88338 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cdh16O88338 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh16O88338 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh16O88338 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cdh16O88338 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh16O88338 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Cdh16O88338 Gm8493-201ENSMUST00000196881 489 ntBASIC17.61■□□□□ 0.41
Cdh16O88338 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh16O88338 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh16O88338 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh16O88338 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cdh16O88338 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh16O88338 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh16O88338 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh16O88338 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.6■□□□□ 0.41
Cdh16O88338 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.6■□□□□ 0.41
Cdh16O88338 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh16O88338 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh16O88338 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdh16O88338 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh16O88338 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Cdh16O88338 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cdh16O88338 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdh16O88338 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Smad6-203ENSMUST00000179458 273 ntBASIC17.59■□□□□ 0.41
Cdh16O88338 Gm27454-201ENSMUST00000185090 204 ntBASIC17.59■□□□□ 0.41
Cdh16O88338 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.59■□□□□ 0.41
Cdh16O88338 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cdh16O88338 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Cdh16O88338 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh16O88338 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.59■□□□□ 0.41
Cdh16O88338 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh16O88338 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.58■□□□□ 0.41
Cdh16O88338 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh16O88338 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.58■□□□□ 0.41
Cdh16O88338 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh16O88338 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cdh16O88338 Haglr-201ENSMUST00000100000 2085 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms