Protein–RNA interactions for Protein: J3QNY1

Gm9242, Predicted pseudogene 9242, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9242J3QNY1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm9242J3QNY1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.24□□□□□ -0.29
Gm9242J3QNY1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Mir6236-201ENSMUST00000184437 123 ntBASIC13.23□□□□□ -0.29
Gm9242J3QNY1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm9242J3QNY1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm9242J3QNY1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms