Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Gm10231-201ENSMUST00000181584 441 ntBASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Gm10175-202ENSMUST00000208752 441 ntBASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4bA6X942 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.23■□□□□ 0.67
Sh2d4bA6X942 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4bA6X942 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4bA6X942 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4bA6X942 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4bA6X942 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4bA6X942 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4bA6X942 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.23■□□□□ 0.67
Sh2d4bA6X942 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4bA6X942 BC021767-201ENSMUST00000126387 1716 ntBASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4bA6X942 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4bA6X942 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Gm5417-201ENSMUST00000079706 384 ntBASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4bA6X942 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.2■□□□□ 0.66
Sh2d4bA6X942 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.19■□□□□ 0.66
Sh2d4bA6X942 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4bA6X942 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4bA6X942 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4bA6X942 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4bA6X942 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4bA6X942 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sh2d4bA6X942 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4bA6X942 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4bA6X942 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4bA6X942 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms