Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm42642-201ENSMUST00000200683 355 ntBASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Nespas-201ENSMUST00000143738 1083 ntBASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm18284-201ENSMUST00000172604 624 ntBASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm6420-201ENSMUST00000193885 723 ntBASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm7514-201ENSMUST00000209475 934 ntBASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv4-53A0A0G2JFC6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.72□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.71□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Igkv4-53A0A0G2JFC6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms