Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm8520-201ENSMUST00000186517 868 ntBASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-1A0A0G2JEU8 BC021767-201ENSMUST00000126387 1716 ntBASIC13.02□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm13168-201ENSMUST00000121771 632 ntBASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm22240-201ENSMUST00000175225 82 ntBASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm37856-201ENSMUST00000191634 999 ntBASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm2559-201ENSMUST00000201323 363 ntBASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm12896-201ENSMUST00000118430 226 ntBASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm43672-201ENSMUST00000199072 1731 ntBASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms