Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.61□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gm14117-201ENSMUST00000122417 843 ntBASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms