Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Gm15546-201ENSMUST00000122095 826 ntBASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Gm5812-201ENSMUST00000061073 957 ntBASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv5A0A0B4J1G9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Gm7860-201ENSMUST00000121190 879 ntBASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv5A0A0B4J1G9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv5A0A0B4J1G9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms