Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Gm14523-201ENSMUST00000117260 558 ntBASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-4A0A075B654 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Gm10399-202ENSMUST00000202768 748 ntBASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav3-4A0A075B654 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3-4A0A075B654 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3-4A0A075B654 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms