Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.15□□□□□ -1.43
Hoxd3P09027 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC6.15□□□□□ -1.43
Hoxd3P09027 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC6.15□□□□□ -1.43
Hoxd3P09027 Gm18432-201ENSMUST00000195568 1451 ntBASIC6.15□□□□□ -1.43
Hoxd3P09027 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxd3P09027 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxd3P09027 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxd3P09027 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxd3P09027 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm5406-201ENSMUST00000120054 766 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm14867-201ENSMUST00000120156 866 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm15049-201ENSMUST00000120474 463 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm14749-201ENSMUST00000121269 333 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm15730-201ENSMUST00000121828 415 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxd3P09027 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm17129-201ENSMUST00000168168 505 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm24576-201ENSMUST00000175508 248 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm26959-201ENSMUST00000182376 978 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm27803-201ENSMUST00000183763 119 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm8304-201ENSMUST00000185744 584 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm28149-201ENSMUST00000187102 378 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm28768-201ENSMUST00000189034 378 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm5734-201ENSMUST00000189787 913 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm29145-201ENSMUST00000189914 456 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm8041-201ENSMUST00000199755 616 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm9278-201ENSMUST00000205508 553 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm17909-201ENSMUST00000207587 907 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.14□□□□□ -1.43
Hoxd3P09027 AC101677.1-201ENSMUST00000218590 158 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxd3P09027 AC154747.4-202ENSMUST00000223826 852 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm23404-201ENSMUST00000082543 97 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm26264-201ENSMUST00000083278 159 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Gm42967-201ENSMUST00000198647 2312 ntBASIC6.14□□□□□ -1.43
Hoxd3P09027 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd3P09027 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Hoxd3P09027 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 AC122346.2-201ENSMUST00000224326 2931 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Aldoart1-202ENSMUST00000179234 2050 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms