Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.42□□□□□ -1.54
Scrt1Q99M85 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.42□□□□□ -1.54
Scrt1Q99M85 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scrt1Q99M85 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scrt1Q99M85 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm15237-201ENSMUST00000122104 469 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm25824-201ENSMUST00000157092 121 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm25962-201ENSMUST00000157173 168 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm16112-201ENSMUST00000159075 382 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm18833-201ENSMUST00000173218 862 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm9529-201ENSMUST00000177598 579 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm38181-201ENSMUST00000181357 720 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm26923-201ENSMUST00000182615 996 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm28080-201ENSMUST00000188552 722 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm37493-201ENSMUST00000193167 433 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm19231-201ENSMUST00000193212 830 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm37196-201ENSMUST00000194762 906 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm8869-201ENSMUST00000195222 947 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm17918-201ENSMUST00000205315 574 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm9088-201ENSMUST00000220237 508 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scrt1Q99M85 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Scrt1Q99M85 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm20486-201ENSMUST00000101544 128 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm15786-201ENSMUST00000121079 450 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm22724-201ENSMUST00000158091 127 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm23757-201ENSMUST00000158353 100 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm23050-201ENSMUST00000158775 165 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Mir3110-201ENSMUST00000175053 80 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm26057-201ENSMUST00000178099 165 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm6472-201ENSMUST00000178147 651 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Mir7685-201ENSMUST00000183555 62 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm29745-201ENSMUST00000198005 687 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm43105-201ENSMUST00000202987 459 ntBASIC5.4□□□□□ -1.54
Scrt1Q99M85 Gm5027-201ENSMUST00000206700 375 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms