Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Col17a1Q07563 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm3216-201ENSMUST00000166927 486 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm3141-201ENSMUST00000168726 499 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC9.48□□□□□ -0.89
Col17a1Q07563 Igkv15-101-201ENSMUST00000195917 299 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm43235-201ENSMUST00000200121 297 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm18468-201ENSMUST00000207321 369 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm18470-201ENSMUST00000207467 420 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm18465-201ENSMUST00000207468 369 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm18464-201ENSMUST00000207803 420 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm18458-201ENSMUST00000207908 369 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm18461-201ENSMUST00000208421 420 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm44982-201ENSMUST00000208795 471 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC9.48□□□□□ -0.89
Col17a1Q07563 AC117769.2-201ENSMUST00000224612 469 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm22300-201ENSMUST00000082661 126 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Mir449a-201ENSMUST00000083641 91 ntBASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC9.48□□□□□ -0.89
Col17a1Q07563 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Col17a1Q07563 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC9.48□□□□□ -0.89
Col17a1Q07563 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Col17a1Q07563 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Col17a1Q07563 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC9.48□□□□□ -0.89
Col17a1Q07563 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col17a1Q07563 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC9.48□□□□□ -0.89
Col17a1Q07563 Gm22709-201ENSMUST00000116893 111 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm6134-201ENSMUST00000117265 171 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm13866-201ENSMUST00000118901 968 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm13818-201ENSMUST00000119441 511 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm11507-201ENSMUST00000156462 412 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm27834-201ENSMUST00000183427 125 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Mir7047-201ENSMUST00000184595 64 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm18127-201ENSMUST00000208479 725 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC9.47□□□□□ -0.89
Col17a1Q07563 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC9.47□□□□□ -0.89
Col17a1Q07563 AC121986.1-201ENSMUST00000218588 781 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 AC158803.2-201ENSMUST00000219452 679 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 AC162467.1-201ENSMUST00000220254 621 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 AC155266.1-201ENSMUST00000220762 904 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Rian-209ENSMUST00000182406 3476 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC9.47□□□□□ -0.89
Col17a1Q07563 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm13000-201ENSMUST00000120937 496 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm14796-201ENSMUST00000121216 959 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm11545-201ENSMUST00000146507 375 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm45739-201ENSMUST00000213094 388 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 AC161114.1-201ENSMUST00000218223 474 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 Gm46191-201ENSMUST00000218899 433 ntBASIC9.47□□□□□ -0.89
Col17a1Q07563 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col17a1Q07563 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Col17a1Q07563 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col17a1Q07563 Gm15170-201ENSMUST00000121593 2023 ntBASIC9.46□□□□□ -0.89
Col17a1Q07563 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col17a1Q07563 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC9.46□□□□□ -0.89
Col17a1Q07563 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col17a1Q07563 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Col17a1Q07563 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col17a1Q07563 Gm42873-201ENSMUST00000196110 1726 ntBASIC9.46□□□□□ -0.89
Col17a1Q07563 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col17a1Q07563 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col17a1Q07563 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms