Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm11105-201ENSMUST00000112781 478 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm13207-201ENSMUST00000119862 773 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm16423-201ENSMUST00000120078 947 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm13991-201ENSMUST00000120190 648 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm21772-201ENSMUST00000169213 478 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm17126-201ENSMUST00000172276 523 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Mir6992-201ENSMUST00000183342 109 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm37005-201ENSMUST00000193281 1164 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm37092-201ENSMUST00000193381 1518 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm7205-201ENSMUST00000196032 1323 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Trav3n-2-201ENSMUST00000197693 334 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm31211-201ENSMUST00000199170 253 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Igkv12-66-201ENSMUST00000199305 348 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Trav3d-2-201ENSMUST00000199874 334 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm8667-201ENSMUST00000211112 449 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 AC153800.1-201ENSMUST00000219212 365 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm17872-201ENSMUST00000222550 532 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Gm16335-201ENSMUST00000077495 309 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Syne4Q8CII8 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.14□□□□□ -1.27
Syne4Q8CII8 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Syne4Q8CII8 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Syne4Q8CII8 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm13604-201ENSMUST00000119332 482 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm13818-201ENSMUST00000119441 511 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Mir3095-201ENSMUST00000175552 87 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm3841-201ENSMUST00000191399 451 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm8454-201ENSMUST00000196980 811 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm44382-201ENSMUST00000198683 122 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm44412-201ENSMUST00000203018 294 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm44213-201ENSMUST00000204977 703 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 AC138284.5-201ENSMUST00000214389 652 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC7.13□□□□□ -1.27
Syne4Q8CII8 AC110381.1-201ENSMUST00000218987 586 ntBASIC7.13□□□□□ -1.27
Syne4Q8CII8 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms