Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.36□□□□□ -1.39
Cstf1Q99LC2 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Gm7731-201ENSMUST00000091759 470 ntBASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Cstf1Q99LC2 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.36□□□□□ -1.39
Cstf1Q99LC2 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm14870-201ENSMUST00000118414 156 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm20397-201ENSMUST00000174520 362 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm9529-201ENSMUST00000177598 579 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Mir6986-201ENSMUST00000184483 58 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm28467-201ENSMUST00000190981 318 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm20926-201ENSMUST00000194457 696 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm36448-201ENSMUST00000199916 438 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm43929-201ENSMUST00000203025 409 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm4374-201ENSMUST00000204929 424 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm44251-201ENSMUST00000204963 442 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Mir7-2-201ENSMUST00000083675 97 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm25515-201ENSMUST00000083858 157 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.35□□□□□ -1.39
Cstf1Q99LC2 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.35□□□□□ -1.39
Cstf1Q99LC2 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Gm15158-201ENSMUST00000120577 570 ntBASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Gm12181-201ENSMUST00000121448 531 ntBASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Mir1907-201ENSMUST00000122509 90 ntBASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.34□□□□□ -1.39
Cstf1Q99LC2 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms