Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm5321-201ENSMUST00000072050 447 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm5453-201ENSMUST00000080866 447 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm24524-201ENSMUST00000082925 170 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 Mir326-201ENSMUST00000083637 95 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm24164-201ENSMUST00000093663 104 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm6304-201ENSMUST00000096579 447 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Prom1-214ENSMUST00000197706 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm21276-201ENSMUST00000179666 2626 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 CT025624.1-201ENSMUST00000224007 2700 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm18852-201ENSMUST00000184149 3593 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.55□□□□□ -2.16
Gm4559A4IF42 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Sla2-201ENSMUST00000029164 2973 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Chrne-202ENSMUST00000102556 1591 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC1.55□□□□□ -2.16
Gm4559A4IF42 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Blnk-202ENSMUST00000117695 1701 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Gm4559A4IF42 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms