Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Upk1bQ9Z2C6 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.79■□□□□ 0.28
Upk1bQ9Z2C6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Gm38205-201ENSMUST00000192243 258 ntBASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk1bQ9Z2C6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.77■□□□□ 0.28
Upk1bQ9Z2C6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upk1bQ9Z2C6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Upk1bQ9Z2C6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upk1bQ9Z2C6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upk1bQ9Z2C6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Upk1bQ9Z2C6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upk1bQ9Z2C6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upk1bQ9Z2C6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.77■□□□□ 0.27
Upk1bQ9Z2C6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Upk1bQ9Z2C6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Mir7075-201ENSMUST00000184187 82 ntBASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk1bQ9Z2C6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Upk1bQ9Z2C6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Upk1bQ9Z2C6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Upk1bQ9Z2C6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.74■□□□□ 0.27
Upk1bQ9Z2C6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1bQ9Z2C6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1bQ9Z2C6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Upk1bQ9Z2C6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Upk1bQ9Z2C6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1bQ9Z2C6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Upk1bQ9Z2C6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1bQ9Z2C6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1bQ9Z2C6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1bQ9Z2C6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Upk1bQ9Z2C6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1bQ9Z2C6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upk1bQ9Z2C6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms