Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl39lQ9CQD0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl39lQ9CQD0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.83□□□□□ -0.52
Rpl39lQ9CQD0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl39lQ9CQD0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Rpl39lQ9CQD0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl39lQ9CQD0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39lQ9CQD0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Gm40881-201ENSMUST00000223397 166 ntBASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Gm10232-201ENSMUST00000089221 720 ntBASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39lQ9CQD0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Gm11175-201ENSMUST00000116172 543 ntBASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rpl39lQ9CQD0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39lQ9CQD0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms