Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdh18Q8VHR0 Gm26833-201ENSMUST00000180899 440 ntBASIC17.39■□□□□ 0.37
Pcdh18Q8VHR0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh18Q8VHR0 Dancr-204ENSMUST00000132389 2347 ntBASIC17.39■□□□□ 0.37
Pcdh18Q8VHR0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh18Q8VHR0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh18Q8VHR0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh18Q8VHR0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh18Q8VHR0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdh18Q8VHR0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh18Q8VHR0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Gm43017-201ENSMUST00000198296 752 ntBASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Gm40848-201ENSMUST00000221998 324 ntBASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdh18Q8VHR0 Haglr-201ENSMUST00000100000 2085 ntBASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdh18Q8VHR0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Gm7860-201ENSMUST00000121190 879 ntBASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms