Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Gm38205-201ENSMUST00000192243 258 ntBASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nup35Q8R4R6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup35Q8R4R6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup35Q8R4R6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Mir7075-201ENSMUST00000184187 82 ntBASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup35Q8R4R6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms