Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cystm1Q8K353 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Gm43173-201ENSMUST00000202246 593 ntBASIC11.31□□□□□ -0.6
Cystm1Q8K353 Spcs1-204ENSMUST00000226782 949 ntBASIC11.31□□□□□ -0.6
Cystm1Q8K353 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cystm1Q8K353 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.3□□□□□ -0.6
Cystm1Q8K353 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cystm1Q8K353 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC11.3□□□□□ -0.6
Cystm1Q8K353 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.29□□□□□ -0.6
Cystm1Q8K353 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms