Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Gm37292-201ENSMUST00000192062 758 ntBASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.18■□□□□ 0.66
Rd3Q8BRE0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Gm12382-201ENSMUST00000122005 922 ntBASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Gm30025-201ENSMUST00000218555 728 ntBASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.17■□□□□ 0.66
Rd3Q8BRE0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.17■□□□□ 0.66
Rd3Q8BRE0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.17■□□□□ 0.66
Rd3Q8BRE0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Gm6433-201ENSMUST00000118634 875 ntBASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Rd3Q8BRE0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rd3Q8BRE0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rd3Q8BRE0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rd3Q8BRE0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rd3Q8BRE0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.14■□□□□ 0.65
Rd3Q8BRE0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rd3Q8BRE0 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.14■□□□□ 0.65
Rd3Q8BRE0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.13■□□□□ 0.65
Rd3Q8BRE0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms