Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smco3Q8BQM7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Smco3Q8BQM7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco3Q8BQM7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.89□□□□□ -0.03
Smco3Q8BQM7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco3Q8BQM7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Fst-202ENSMUST00000223640 2612 ntBASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smco3Q8BQM7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms