Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Gm43017-201ENSMUST00000198296 752 ntBASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf18Q8BM39 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.16■□□□□ 0.34
Prpf18Q8BM39 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Prpf18Q8BM39 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf18Q8BM39 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Gm26833-201ENSMUST00000180899 440 ntBASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf18Q8BM39 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Prpf18Q8BM39 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms