Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.2■□□□□ 0.83
Abcf1Q6P542 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Abcf1Q6P542 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.2■□□□□ 0.82
Abcf1Q6P542 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.2■□□□□ 0.82
Abcf1Q6P542 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Abcf1Q6P542 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Abcf1Q6P542 Gm10849-201ENSMUST00000100397 618 ntBASIC20.2■□□□□ 0.82
Abcf1Q6P542 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Abcf1Q6P542 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Abcf1Q6P542 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.2■□□□□ 0.82
Abcf1Q6P542 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Abcf1Q6P542 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Abcf1Q6P542 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Abcf1Q6P542 Fst-202ENSMUST00000223640 2612 ntBASIC20.2■□□□□ 0.82
Abcf1Q6P542 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Abcf1Q6P542 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Abcf1Q6P542 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.19■□□□□ 0.82
Abcf1Q6P542 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcf1Q6P542 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abcf1Q6P542 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Abcf1Q6P542 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Abcf1Q6P542 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.18■□□□□ 0.82
Abcf1Q6P542 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.18■□□□□ 0.82
Abcf1Q6P542 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Abcf1Q6P542 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abcf1Q6P542 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.18■□□□□ 0.82
Abcf1Q6P542 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abcf1Q6P542 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abcf1Q6P542 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abcf1Q6P542 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abcf1Q6P542 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Gm8969-201ENSMUST00000199694 526 ntBASIC20.17■□□□□ 0.82
Abcf1Q6P542 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.17■□□□□ 0.82
Abcf1Q6P542 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Abcf1Q6P542 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.16■□□□□ 0.82
Abcf1Q6P542 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Abcf1Q6P542 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.16■□□□□ 0.82
Abcf1Q6P542 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.16■□□□□ 0.82
Abcf1Q6P542 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Abcf1Q6P542 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Abcf1Q6P542 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Abcf1Q6P542 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Abcf1Q6P542 Gm38205-201ENSMUST00000192243 258 ntBASIC20.14■□□□□ 0.81
Abcf1Q6P542 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Abcf1Q6P542 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Abcf1Q6P542 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Abcf1Q6P542 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Abcf1Q6P542 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms