Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac4Q6NZM9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac4Q6NZM9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hdac4Q6NZM9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.18■□□□□ 0.82
Hdac4Q6NZM9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac4Q6NZM9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Hdac4Q6NZM9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac4Q6NZM9 Gm38285-201ENSMUST00000192928 922 ntBASIC20.18■□□□□ 0.82
Hdac4Q6NZM9 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.18■□□□□ 0.82
Hdac4Q6NZM9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac4Q6NZM9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac4Q6NZM9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac4Q6NZM9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac4Q6NZM9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac4Q6NZM9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac4Q6NZM9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms