Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sec61a1P61620 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sec61a1P61620 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sec61a1P61620 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 Gm37179-201ENSMUST00000194862 823 ntBASIC15.89■□□□□ 0.13
Sec61a1P61620 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sec61a1P61620 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Sec61a1P61620 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a1P61620 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sec61a1P61620 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.88■□□□□ 0.13
Sec61a1P61620 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a1P61620 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a1P61620 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a1P61620 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Sec61a1P61620 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a1P61620 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.88■□□□□ 0.13
Sec61a1P61620 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a1P61620 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Sec61a1P61620 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a1P61620 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.88■□□□□ 0.13
Sec61a1P61620 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Sec61a1P61620 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a1P61620 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a1P61620 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.88■□□□□ 0.13
Sec61a1P61620 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a1P61620 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a1P61620 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.88■□□□□ 0.13
Sec61a1P61620 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a1P61620 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a1P61620 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a1P61620 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a1P61620 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a1P61620 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Sec61a1P61620 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a1P61620 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a1P61620 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.87■□□□□ 0.13
Sec61a1P61620 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.87■□□□□ 0.13
Sec61a1P61620 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a1P61620 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a1P61620 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a1P61620 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sec61a1P61620 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Sec61a1P61620 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.86■□□□□ 0.13
Sec61a1P61620 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.86■□□□□ 0.13
Sec61a1P61620 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sec61a1P61620 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.86■□□□□ 0.13
Sec61a1P61620 Gm38205-201ENSMUST00000192243 258 ntBASIC15.86■□□□□ 0.13
Sec61a1P61620 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Sec61a1P61620 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a1P61620 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.85■□□□□ 0.13
Sec61a1P61620 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.85■□□□□ 0.13
Sec61a1P61620 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.85■□□□□ 0.13
Sec61a1P61620 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.85■□□□□ 0.13
Sec61a1P61620 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.85■□□□□ 0.13
Sec61a1P61620 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Sec61a1P61620 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Sec61a1P61620 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a1P61620 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms