Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ApoeP08226 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ApoeP08226 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ApoeP08226 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ApoeP08226 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ApoeP08226 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.09■□□□□ 0.33
ApoeP08226 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.09■□□□□ 0.33
ApoeP08226 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ApoeP08226 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ApoeP08226 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ApoeP08226 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ApoeP08226 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ApoeP08226 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.08■□□□□ 0.32
ApoeP08226 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ApoeP08226 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ApoeP08226 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ApoeP08226 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ApoeP08226 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ApoeP08226 Gm43173-201ENSMUST00000202246 593 ntBASIC17.08■□□□□ 0.32
ApoeP08226 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ApoeP08226 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
ApoeP08226 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ApoeP08226 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ApoeP08226 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ApoeP08226 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.07■□□□□ 0.32
ApoeP08226 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ApoeP08226 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.07■□□□□ 0.32
ApoeP08226 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ApoeP08226 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ApoeP08226 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Mir7075-201ENSMUST00000184187 82 ntBASIC17.07■□□□□ 0.32
ApoeP08226 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.07■□□□□ 0.32
ApoeP08226 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
ApoeP08226 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ApoeP08226 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.06■□□□□ 0.32
ApoeP08226 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.06■□□□□ 0.32
ApoeP08226 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.06■□□□□ 0.32
ApoeP08226 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ApoeP08226 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.06■□□□□ 0.32
ApoeP08226 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.06■□□□□ 0.32
ApoeP08226 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ApoeP08226 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ApoeP08226 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.06■□□□□ 0.32
ApoeP08226 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ApoeP08226 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
ApoeP08226 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ApoeP08226 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ApoeP08226 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ApoeP08226 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ApoeP08226 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
ApoeP08226 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ApoeP08226 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms