Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gm18671-201ENSMUST00000214826 683 ntBASIC12.78□□□□□ -0.36
Sh2d1aO88890 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2d1aO88890 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.77□□□□□ -0.36
Sh2d1aO88890 Fst-202ENSMUST00000223640 2612 ntBASIC12.77□□□□□ -0.36
Sh2d1aO88890 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2d1aO88890 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Sh2d1aO88890 Gm13534-201ENSMUST00000121169 513 ntBASIC12.77□□□□□ -0.37
Sh2d1aO88890 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Gm42642-201ENSMUST00000200683 355 ntBASIC12.77□□□□□ -0.37
Sh2d1aO88890 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.77□□□□□ -0.37
Sh2d1aO88890 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh2d1aO88890 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.77□□□□□ -0.37
Sh2d1aO88890 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh2d1aO88890 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Nespas-201ENSMUST00000143738 1083 ntBASIC12.76□□□□□ -0.37
Sh2d1aO88890 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.76□□□□□ -0.37
Sh2d1aO88890 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d1aO88890 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Gm6420-201ENSMUST00000193885 723 ntBASIC12.75□□□□□ -0.37
Sh2d1aO88890 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.75□□□□□ -0.37
Sh2d1aO88890 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d1aO88890 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.74□□□□□ -0.37
Sh2d1aO88890 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d1aO88890 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d1aO88890 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d1aO88890 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d1aO88890 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d1aO88890 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Sh2d1aO88890 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d1aO88890 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms