Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm10602-201ENSMUST00000098239 609 ntBASIC17.28■□□□□ 0.36
Hcn1O88704 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.28■□□□□ 0.36
Hcn1O88704 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn1O88704 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Hcn1O88704 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.27■□□□□ 0.36
Hcn1O88704 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hcn1O88704 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Mir5133-201ENSMUST00000174955 77 ntBASIC17.27■□□□□ 0.36
Hcn1O88704 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hcn1O88704 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Gm6365-201ENSMUST00000054711 744 ntBASIC17.27■□□□□ 0.36
Hcn1O88704 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn1O88704 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hcn1O88704 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hcn1O88704 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hcn1O88704 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.27■□□□□ 0.35
Hcn1O88704 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hcn1O88704 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hcn1O88704 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hcn1O88704 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Hcn1O88704 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn1O88704 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hcn1O88704 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hcn1O88704 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Gm7290-201ENSMUST00000104990 617 ntBASIC17.25■□□□□ 0.35
Hcn1O88704 Gm12918-201ENSMUST00000120234 636 ntBASIC17.25■□□□□ 0.35
Hcn1O88704 Gm15710-201ENSMUST00000121821 636 ntBASIC17.25■□□□□ 0.35
Hcn1O88704 Gm5075-201ENSMUST00000196916 622 ntBASIC17.25■□□□□ 0.35
Hcn1O88704 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.25■□□□□ 0.35
Hcn1O88704 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.25■□□□□ 0.35
Hcn1O88704 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hcn1O88704 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hcn1O88704 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn1O88704 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.24■□□□□ 0.35
Hcn1O88704 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.24■□□□□ 0.35
Hcn1O88704 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hcn1O88704 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn1O88704 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hcn1O88704 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn1O88704 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn1O88704 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn1O88704 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn1O88704 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Hcn1O88704 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn1O88704 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.23■□□□□ 0.35
Hcn1O88704 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn1O88704 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn1O88704 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms