Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Cacna1hO88427 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.64■□□□□ 0.41
Cacna1hO88427 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1hO88427 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1hO88427 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1hO88427 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1hO88427 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Cacna1hO88427 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1hO88427 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.63■□□□□ 0.41
Cacna1hO88427 Gm13884-201ENSMUST00000118103 829 ntBASIC17.63■□□□□ 0.41
Cacna1hO88427 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1hO88427 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.63■□□□□ 0.41
Cacna1hO88427 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1hO88427 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1hO88427 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1hO88427 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1hO88427 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cacna1hO88427 Gm7638-201ENSMUST00000121348 967 ntBASIC17.62■□□□□ 0.41
Cacna1hO88427 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cacna1hO88427 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.62■□□□□ 0.41
Cacna1hO88427 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.62■□□□□ 0.41
Cacna1hO88427 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1hO88427 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1hO88427 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1hO88427 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1hO88427 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.62■□□□□ 0.41
Cacna1hO88427 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cacna1hO88427 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1hO88427 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1hO88427 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.62■□□□□ 0.41
Cacna1hO88427 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1hO88427 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1hO88427 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.61■□□□□ 0.41
Cacna1hO88427 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cacna1hO88427 Mir2861-201ENSMUST00000175539 82 ntBASIC17.61■□□□□ 0.41
Cacna1hO88427 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.61■□□□□ 0.41
Cacna1hO88427 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cacna1hO88427 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cacna1hO88427 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1hO88427 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.6■□□□□ 0.41
Cacna1hO88427 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Gm11594-201ENSMUST00000122313 162 ntBASIC17.6■□□□□ 0.41
Cacna1hO88427 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.6■□□□□ 0.41
Cacna1hO88427 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1hO88427 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cacna1hO88427 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.59■□□□□ 0.41
Cacna1hO88427 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.59■□□□□ 0.41
Cacna1hO88427 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cacna1hO88427 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.59■□□□□ 0.41
Cacna1hO88427 Auts2-212ENSMUST00000178555 309 ntBASIC17.59■□□□□ 0.41
Cacna1hO88427 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.59■□□□□ 0.41
Cacna1hO88427 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1hO88427 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cacna1hO88427 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cacna1hO88427 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cacna1hO88427 Gm45328-201ENSMUST00000210942 917 ntBASIC17.58■□□□□ 0.41
Cacna1hO88427 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.58■□□□□ 0.41
Cacna1hO88427 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1hO88427 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1hO88427 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1hO88427 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1hO88427 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1hO88427 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms