Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.34■□□□□ 0.69
Usp35M0QWN7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp35M0QWN7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp35M0QWN7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp35M0QWN7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp35M0QWN7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp35M0QWN7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp35M0QWN7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp35M0QWN7 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.33■□□□□ 0.69
Usp35M0QWN7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp35M0QWN7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp35M0QWN7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp35M0QWN7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Usp35M0QWN7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp35M0QWN7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp35M0QWN7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp35M0QWN7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp35M0QWN7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp35M0QWN7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp35M0QWN7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp35M0QWN7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp35M0QWN7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp35M0QWN7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp35M0QWN7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp35M0QWN7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp35M0QWN7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp35M0QWN7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp35M0QWN7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp35M0QWN7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.3■□□□□ 0.68
Usp35M0QWN7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.3■□□□□ 0.68
Usp35M0QWN7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp35M0QWN7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp35M0QWN7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp35M0QWN7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.28■□□□□ 0.68
Usp35M0QWN7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp35M0QWN7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms