Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim55G3X8Y1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Gm7143-201ENSMUST00000222811 859 ntBASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.57■□□□□ 0.56
Trim55G3X8Y1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim55G3X8Y1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trim55G3X8Y1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Gm15039-201ENSMUST00000118914 875 ntBASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Gm45102-201ENSMUST00000207427 857 ntBASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim55G3X8Y1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim55G3X8Y1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Haglr-201ENSMUST00000100000 2085 ntBASIC18.53■□□□□ 0.56
Trim55G3X8Y1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim55G3X8Y1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms