Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pcdh9F8VPK8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh9F8VPK8 Nespas-201ENSMUST00000143738 1083 ntBASIC18.52■□□□□ 0.56
Pcdh9F8VPK8 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.52■□□□□ 0.56
Pcdh9F8VPK8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Pcdh9F8VPK8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh9F8VPK8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh9F8VPK8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh9F8VPK8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh9F8VPK8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Pcdh9F8VPK8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh9F8VPK8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh9F8VPK8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh9F8VPK8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Gm8969-201ENSMUST00000199694 526 ntBASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh9F8VPK8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh9F8VPK8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 AV356131-201ENSMUST00000206201 750 ntBASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdh9F8VPK8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdh9F8VPK8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Gm26571-201ENSMUST00000181399 666 ntBASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh9F8VPK8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh9F8VPK8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdh9F8VPK8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh9F8VPK8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh9F8VPK8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh9F8VPK8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh9F8VPK8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Pcdh9F8VPK8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh9F8VPK8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh9F8VPK8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh9F8VPK8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh9F8VPK8 Gm7514-201ENSMUST00000209475 934 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms