Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-5A0A075B6B9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-5A0A075B6B9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6d-5A0A075B6B9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6d-5A0A075B6B9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6d-5A0A075B6B9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6d-5A0A075B6B9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6d-5A0A075B6B9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm45102-201ENSMUST00000207427 857 ntBASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav6d-5A0A075B6B9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms