Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Tgds-204ENSMUST00000228543 1594 ntBASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-3A0A075B6A4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trav12d-3A0A075B6A4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Gm45444-201ENSMUST00000211394 898 ntBASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12d-3A0A075B6A4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms