Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Trav4-4-dv10A0A075B651 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-4-dv10A0A075B651 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trav4-4-dv10A0A075B651 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.08□□□□□ -0.15
Trav4-4-dv10A0A075B651 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav4-4-dv10A0A075B651 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav4-4-dv10A0A075B651 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-4-dv10A0A075B651 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm6139-201ENSMUST00000079261 882 ntBASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-4-dv10A0A075B651 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms