Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm26833-201ENSMUST00000180899 440 ntBASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm21956-201ENSMUST00000179946 522 ntBASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm40848-201ENSMUST00000221998 324 ntBASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm12821-201ENSMUST00000120022 600 ntBASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm8969-201ENSMUST00000199694 526 ntBASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms