Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Gm28497-201ENSMUST00000189646 3029 ntBASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Gm38699-201ENSMUST00000221301 1740 ntBASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Gm19074-201ENSMUST00000218915 1429 ntBASIC7.69□□□□□ -1.18
Pcdhb7Q8CDY9 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm10727-201ENSMUST00000197107 1602 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Klf10-202ENSMUST00000226363 2917 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm3675-201ENSMUST00000175904 1653 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm12077-201ENSMUST00000117049 364 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm15266-201ENSMUST00000119635 255 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm22847-201ENSMUST00000157707 105 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm23663-201ENSMUST00000158045 80 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm23824-201ENSMUST00000158741 276 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm26505-201ENSMUST00000176208 166 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm8221-201ENSMUST00000178052 564 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm28191-201ENSMUST00000189112 211 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm18797-201ENSMUST00000190809 1174 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm7512-201ENSMUST00000195217 1170 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm43368-201ENSMUST00000200638 409 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm7039-201ENSMUST00000205138 346 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm3189-201ENSMUST00000205595 832 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm8575-201ENSMUST00000210262 521 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm45874-201ENSMUST00000212423 346 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 AC131720.2-201ENSMUST00000220420 431 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 AC123920.1-201ENSMUST00000221449 384 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 AC124510.2-201ENSMUST00000221958 683 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 CT009713.9-201ENSMUST00000223604 389 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 AC137871.2-201ENSMUST00000226482 289 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 AC124715.2-201ENSMUST00000226762 617 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 AC107452.2-201ENSMUST00000228415 363 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm26108-201ENSMUST00000083973 191 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 AC164433.1-201ENSMUST00000226138 1544 ntBASIC7.68□□□□□ -1.18
Pcdhb7Q8CDY9 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Pcdhb7Q8CDY9 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms